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surehyb-enabled hybridization chamber  (Agilent technologies)


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    Structured Review

    Agilent technologies surehyb-enabled hybridization chamber
    Surehyb Enabled Hybridization Chamber, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/surehyb+chambers/pm38203750-383-18-17
    Average 90 stars, based on 1 article reviews
    surehyb-enabled hybridization chamber - by Bioz Stars, 2026-10
    90/100 stars

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    Incubation:

    Article Title: Curcumin is a potent modulator of microglial gene expression and migration
    Article Snippet: Briefly, 200 ng of total RNA were labeled with Cy3 using the Agilent Quick-Amp Labeling Kit - 1 color according to the manufacturer's instructions. cRNA was purified with the RNeasy Mini Kit (Qiagen) and labeling efficiency was determined with a NanoDrop ND-1000 photometer (PeqLab). .. The arrays were incubated with cRNAs in Agilent SureHyb chambers for 17 hours at 65°C while rotating. .. After washing, scanning was done with the Agilent G2565CA Microarray Scanner System and the resulting TIFF files were processed with Agilent Feature Extraction software (10.7.).

    Hybridization:

    Article Title: Th17 cells target the metabolic miR-142-5p-SDHC/SDHD axis promoting invasiveness and progression of cervical cancers
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65°C, 17 hours, 10 rpm in the SureHyb chambers (Agilent Technologies). .. After two washing steps the microarray slide was scanned on the Agilent Microarray Scanner G2565BA (Agilent Technologies).

    Article Title: Assessing the Link between Diabetic Metabolic Dysregulation and Breast Cancer Progression
    Article Snippet: Finally, the labelled cRNA samples were fragmented at 60 °C and hybridized onto an Agilent Human Gene Expression Microarray 8 × 60 K. The Gene Expression Hybridization kit (Agilent Technologies, in situ Hybridization kit, Part Number 5190-0404) fragmented the labelled cRNA. .. Next, hybridization was performed in Agilent’s Surehyb Chambers at 65 °C for 16 h, after which they were washed using Agilent Gene Expression wash buffers (Agilent Technologies, Part Number 5188-5327) and scanned using the Agilent Microarray Scanner (Agilent Technologies, Part Number G2600D). .. Agilent Feature Extraction software (v11.5.1.1) extracted raw data from the scanned images and fed them into the Agilent GeneSpring GX (v14.5) software for analysis.

    Article Title: Th17 cells target the metabolic miR-142-5p-succinate dehydrogenase subunit C/D (SDHC/SDHD) axis, promoting invasiveness and progression of cervical cancers.
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65 °C, 17 h, 10 r.p.m. in the SureHyb chambers (Agilent Technologies). .. The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany).

    Article Title: Influence of cell cycle on responses of MCF-7 cells to benzo[a]pyrene
    Article Snippet: Agilent Human 4 × 44K Genome-wide arrays were used and the reference design was applied, whereby a Universal Human Reference RNA (Stratagene, La Jolla, USA) was hybridised to every sample. .. Cy3-(sample)- and Cy5-(reference)-labelled probes were hybridised to the oligo microarrays using the Gene Expression Hybridization Kit (Agilent Technologies, UK) using Agilent SureHyb chambers for 17 hours in Rotisserie Hyb Oven set to 65°C (Agilent) and rotating at 10 rpm. .. The array slides were washed according to the manufacturer's instructions (Agilent) and dried with compressed air prior to scanning on an Axon B400 Scanner (Axon, Instruments, USA).

    Labeling:

    Article Title: Th17 cells target the metabolic miR-142-5p-SDHC/SDHD axis promoting invasiveness and progression of cervical cancers
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65°C, 17 hours, 10 rpm in the SureHyb chambers (Agilent Technologies). .. After two washing steps the microarray slide was scanned on the Agilent Microarray Scanner G2565BA (Agilent Technologies).

    Article Title: MiRNA-205 modulates cellular invasion and migration via regulating zinc finger E-box binding homeobox 2 expression in esophageal squamous cell carcinoma cells
    Article Snippet: One hundred ng of each total RNA aliquot were treated with calf intestine phosphatase (GE Healthcare, Chalfont St Giles, UK), denatured using DMSO (Sigma, St Louis, MO), and directly labeled with Cy3 using T4 RNA ligase (GE Healthcare). .. Labeled samples were hybridized to the miR array 8 × 15 k (G4470A) platforms in SureHyb chambers (Agilent), washed with the buffer supplied (Agilent), according to the manufacturer's instructions, and scanned using an Agilent Scanner (G2505B). .. Data were extracted using Feature Extraction Software 9.3 and GeneSpring software (Agilent).

    Article Title: Th17 cells target the metabolic miR-142-5p-succinate dehydrogenase subunit C/D (SDHC/SDHD) axis, promoting invasiveness and progression of cervical cancers.
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65 °C, 17 h, 10 r.p.m. in the SureHyb chambers (Agilent Technologies). .. The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany).

    Microarray:

    Article Title: Th17 cells target the metabolic miR-142-5p-SDHC/SDHD axis promoting invasiveness and progression of cervical cancers
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65°C, 17 hours, 10 rpm in the SureHyb chambers (Agilent Technologies). .. After two washing steps the microarray slide was scanned on the Agilent Microarray Scanner G2565BA (Agilent Technologies).

    Article Title: Assessing the Link between Diabetic Metabolic Dysregulation and Breast Cancer Progression
    Article Snippet: Finally, the labelled cRNA samples were fragmented at 60 °C and hybridized onto an Agilent Human Gene Expression Microarray 8 × 60 K. The Gene Expression Hybridization kit (Agilent Technologies, in situ Hybridization kit, Part Number 5190-0404) fragmented the labelled cRNA. .. Next, hybridization was performed in Agilent’s Surehyb Chambers at 65 °C for 16 h, after which they were washed using Agilent Gene Expression wash buffers (Agilent Technologies, Part Number 5188-5327) and scanned using the Agilent Microarray Scanner (Agilent Technologies, Part Number G2600D). .. Agilent Feature Extraction software (v11.5.1.1) extracted raw data from the scanned images and fed them into the Agilent GeneSpring GX (v14.5) software for analysis.

    Article Title: Th17 cells target the metabolic miR-142-5p-succinate dehydrogenase subunit C/D (SDHC/SDHD) axis, promoting invasiveness and progression of cervical cancers.
    Article Snippet: The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany). .. The hybridization of 600 ng labeled cRNA to the microarray slide was carried out at 65 °C, 17 h, 10 r.p.m. in the SureHyb chambers (Agilent Technologies). .. The purification of the labeled cDNA was performed with RNeasy Mini kit (Qiagen, Hilden, Germany) according to Agilent’s One-Color Gene Expression Microarray Protocol followed by the quantification using a NanoDrop2000 Spectrophotometer (Thermo Fisher Scientific, Schwerte, Germany).

    Functional Assay:

    Article Title: Oxidative Nanopatterning of Titanium Surface Influences mRNA and MicroRNA Expression in Human Alveolar Bone Osteoblastic Cells
    Article Snippet: Briefly, 500 ng of the individual total RNA was employed to synthesize double-stranded cDNA and cyanine 3 (Cy3) CTP labeled complementary amplified RNA (cRNA) by means of the Agilent Linear Amplification Kit (Agilent), according to the manufacturer's instructions. .. By using Agilent human 4 × 44 K oligonucleotide microarrays (Agilent), cyanine-labeled complementary RNA was hybridized to microarrays in SureHyb chambers (Agilent) in a rotator oven at 65°C, for 17 h. Each array contained 44,000 oligonucleotide probes covering the entire human functional genome. .. The arrays were washed according to the manufacturer's instructions and scanned with an Agilent DNA Microarray scanner.

    other:

    Article Title: Amyloid fibril-based thixotropic hydrogels for modeling of tumor spheroids in vitro.
    Article Snippet: Biomaterials mimicking extracellular matrices (ECM) for three-dimensional (3D) cultures have gained immense interest in tumor modeling and in vitro organ development.. Here, we introduce a new class of amyloid fibrilbased peptide hydrogels as a versatile biomimetic ECM scaffold for 3D cell culture and homogenous tumor spheroid modeling.. We show that these amyloid fibril-based hydrogels are thixotropic and allow cancer cell adhesion, proliferation, and migration.

    Gene Expression:

    Article Title: Assessing the Link between Diabetic Metabolic Dysregulation and Breast Cancer Progression
    Article Snippet: Finally, the labelled cRNA samples were fragmented at 60 °C and hybridized onto an Agilent Human Gene Expression Microarray 8 × 60 K. The Gene Expression Hybridization kit (Agilent Technologies, in situ Hybridization kit, Part Number 5190-0404) fragmented the labelled cRNA. .. Next, hybridization was performed in Agilent’s Surehyb Chambers at 65 °C for 16 h, after which they were washed using Agilent Gene Expression wash buffers (Agilent Technologies, Part Number 5188-5327) and scanned using the Agilent Microarray Scanner (Agilent Technologies, Part Number G2600D). .. Agilent Feature Extraction software (v11.5.1.1) extracted raw data from the scanned images and fed them into the Agilent GeneSpring GX (v14.5) software for analysis.

    Article Title: Influence of cell cycle on responses of MCF-7 cells to benzo[a]pyrene
    Article Snippet: Agilent Human 4 × 44K Genome-wide arrays were used and the reference design was applied, whereby a Universal Human Reference RNA (Stratagene, La Jolla, USA) was hybridised to every sample. .. Cy3-(sample)- and Cy5-(reference)-labelled probes were hybridised to the oligo microarrays using the Gene Expression Hybridization Kit (Agilent Technologies, UK) using Agilent SureHyb chambers for 17 hours in Rotisserie Hyb Oven set to 65°C (Agilent) and rotating at 10 rpm. .. The array slides were washed according to the manufacturer's instructions (Agilent) and dried with compressed air prior to scanning on an Axon B400 Scanner (Axon, Instruments, USA).



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